Stanford University undergraduate honors thesis style — modifications to the report style. This is unofficial and created originally for theses in the Civil & Environmental Engineering department. Modified from the 'suthesis-2e' PhD thesis style document for Stanford University PhD dissertations by Joseph Pallas and modified by Emma Pease.
This is a template we have designed to facilitate the reporting of whole genome sequencing-based results for Mycobacterium tuberculosis diagnosis, phenotyping, and epidemiologcal clustering. A manuscript describing how we arrived at this template is being submitted to PeerJ in October, 2017. We will update this document with a link to the article – "Evidence-Based Design and Evaluation of a Whole Genome Sequencing Clinical Report for the Reference Microbiology Laboratory" – when it comes online.